[wpiutil] Add protobuf to thirdparty sources (#5746)

.github/workflows/upstream-utils.yml

@@ -65,6 +65,10 @@ jobs:
         run: |
           cd upstream_utils
           ./update_memory.py
+      - name: Run update_protobuf.py
+        run: |
+          cd upstream_utils
+          ./update_protobuf.py
       - name: Add untracked files to index so they count as changes
         run: git add -A
       - name: Check output